Transcript: LANCL1-AS1:1

Basic information

LNCipedia transcript ID: LANCL1-AS1:1 
LNCipedia gene ID: LANCL1-AS1
RefSeq ID: NR_110605
Location (hg19): chr2:211189436-211335057
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2142 bp
Exons: 6
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_110605; NR_110605.1
Alternative gene names: LANCLOT; LANCL1-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -113.0979 non-coding 
CPAT coding probability 0.17% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LANCL1-AS1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CPS1-1:6
4.0 LANCL1-AS1:1
4.1 LANCL1-AS1:1
5.0 LANCL1-AS1:1
5.1 LANCL1-AS1:1
5.2 LANCL1-AS1:1