Transcript: LARGE-AS1:11

Basic information

LNCipedia transcript ID: LARGE-AS1:11 
LNCipedia gene ID: LARGE-AS1
Location (hg19): chr22:34128267-34146715
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 912 bp
Exons: 5
Sources: NONCODE v4
Alternative transcript names: NONHSAT085018
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -116.155 non-coding 
CPAT coding probability 0.57% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LARGE-AS1:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TIMP3-6:13
4.0 LARGE-AS1:11
4.1 LARGE-AS1:11
5.0 LARGE-AS1:11
5.1 LARGE-AS1:11
5.2 LARGE-AS1:11