Transcript: LBX1-AS1:2

Basic information

LNCipedia transcript ID: LBX1-AS1:2 
LNCipedia gene ID: LBX1-AS1
RefSeq ID: NR_029380
Location (hg19): chr10:102989351-102998616
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1323 bp
Exons: 3
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT016034; NR_029380; NR_029380.1
Alternative gene names: FLJ41350; LBX1-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -129.3435 non-coding 
CPAT coding probability 24.83% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LBX1-AS1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TLX1-2:7
4.0 LBX1-AS1:2
4.1 LBX1-AS1:2
5.0 LBX1-AS1:2
5.1 LBX1-AS1:2
5.2 LBX1-AS1:2