Transcript: LGALSL-DT:11

Basic information

LNCipedia transcript ID: LGALSL-DT:11 
LNCipedia gene ID: LGALSL-DT
Location (hg19): chr2:64618580-64681524
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 4298 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000223935.1|MICT00000190526.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -22.9916 non-coding 
CPAT coding probability 12.71% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LGALSL-DT:11 no no no no

Available literature

  1. Fei (2018), Identification of aberrantly expressed long non-coding RNAs in postmenopausal osteoporosis., Int. J. Mol. Med.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SERTAD2-4:6
5.0 lnc-SERTAD2-4:6
5.1 LGALSL-DT:5
5.2 LGALSL-DT:11