Transcript: LHFPL3-AS1:8

Basic information

LNCipedia transcript ID: LHFPL3-AS1:8 
HGNC Gene Symbol: LHFPL3-AS1    
HGNC Full Gene Name: LHFPL3 antisense RNA 1
Ensembl Gene ID: ENSG00000226869
Ensembl Transcript ID: ENST00000450896
Location (hg19): chr7:104439840-104443986
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 890 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000450896.1; RP11-203P23.1-004; OTTHUMT00000348296.1; NONHSAT122571
Alternative gene names: ENSG00000226869.2; RP11-203P23.1; OTTHUMG00000157276.2; LHFPL3-AS1; ENSG00000226869.6;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -132.7975 non-coding 
CPAT coding probability 5.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LHFPL3-AS1:8 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SRPK2-4:6
4.0 LHFPL3-AS1:8
4.1 LHFPL3-AS1:8
5.0 LHFPL3-AS1:8
5.1 LHFPL3-AS1:8
5.2 LHFPL3-AS1:8