Transcript: LIMD1-AS1:6

Basic information

LNCipedia transcript ID: LIMD1-AS1:6 
LNCipedia gene ID: LIMD1-AS1
Location (hg19): chr3:45720535-45730671
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1833 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000230530.1|ENST00000427644.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -129.6527 non-coding 
CPAT coding probability 37.28% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LIMD1-AS1:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 LIMD1-AS1:6
5.0 LIMD1-AS1:6
5.1 LIMD1-AS1:6
5.2 LIMD1-AS1:6