Transcript: LIN28B-AS1:8

Basic information

LNCipedia transcript ID: LIN28B-AS1:8 
LNCipedia gene ID: LIN28B-AS1
Location (hg19): chr6:105373962-105388309
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1053 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000203809.5|FTMT22100038335.1
Alternative gene names: dJ439I14.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -37.1567 non-coding 
CPAT coding probability 0.52% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LIN28B-AS1:8 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 LIN28B-AS1:8
5.0 LIN28B-AS1:8
5.1 LIN28B-AS1:8
5.2 LIN28B-AS1:8