Transcript: LINC00092:13

Basic information

LNCipedia transcript ID: LINC00092:13 
LNCipedia gene ID: LINC00092
Location (hg19): chr9:98789947-98790245
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 299 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000225194.2|FTMT23400007077.1
Alternative gene names: bA346B7.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -163.6878 non-coding 
CPAT coding probability 20.80% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00092:13 no no no no

Available literature

  1. Zhao (2017), Long Noncoding RNA LINC00092 Acts in Cancer-Associated Fibroblasts to Drive Glycolysis and Progression of Ovarian Cancer., Cancer Res.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 LINC00092:13
5.0 LINC00092:13
5.1 LINC00092:13
5.2 LINC00092:13