Transcript: LINC00158:4

Basic information

LNCipedia transcript ID: LINC00158:4 
LNCipedia gene ID: LINC00158
Location (hg19): chr21:26791761-26798916
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3403 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT081485; FPKM1_group_19973_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -20.2837 non-coding 
CPAT coding probability 1.71% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00158:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MRPL39-5:5
4.0 LINC00158:4
4.1 LINC00158:4
5.0 LINC00158:4
5.1 LINC00158:4
5.2 LINC00158:4