Transcript: LINC00174:12

Basic information

LNCipedia transcript ID: LINC00174:12 
LNCipedia gene ID: LINC00174
Location (hg19): chr7:65840589-65958543
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 8868 bp
Exons: 25
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000179406.6|MICT00000325629.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 114.3632 coding 
CPAT coding probability 70.72% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC00174:12 yes no no no

Available literature

  1. Shen (2018), STAT1-mediated upregulation of lncRNA LINC00174 functions a ceRNA for miR-1910-3p to facilitate colorectal carcinoma progression through regulation of TAZ., Gene


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 LINC00174:12
5.0 LINC00174:12
5.1 LINC00174:12
5.2 LINC00174:12