Transcript: LINC00174:17

Basic information

LNCipedia transcript ID: LINC00174:17 
HGNC Gene Symbol: LINC00174    
HGNC Full Gene Name: long intergenic non-protein coding RNA 174
Ensembl Gene ID: ENSG00000179406
Ensembl Transcript ID: ENST00000429320
Location (hg19): chr7:65941290-65955046
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 498 bp
Exons: 7
Sources: NONCODE v4; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT121184; ENST00000429320.1
Alternative gene names: ; ENSG00000179406.7; LINC00174


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 6.1807 non-coding 
CPAT coding probability 10.79% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00174:17 no no no no

Available literature

  1. Shen (2018), STAT1-mediated upregulation of lncRNA LINC00174 functions a ceRNA for miR-1910-3p to facilitate colorectal carcinoma progression through regulation of TAZ., Gene


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GUSB-14:2
4.0 lnc-GUSB-5:19
4.1 LINC00174:17
5.0 LINC00174:17
5.1 LINC00174:17
5.2 LINC00174:17