Transcript: LINC00205:19

Basic information

LNCipedia transcript ID: LINC00205:19 
LNCipedia gene ID: LINC00205
Location (hg19): chr21:46719823-46720812
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 609 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00029061; NONHSAT082949
Alternative gene names: XLOC_013981; linc-COL18A1-4;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -279.0848 non-coding 
CPAT coding probability 3.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00205:19 no no no no

Available literature

  1. Reymond (2002), Nineteen additional unpredicted transcripts from human chromosome 21., Genomics


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ADARB1-3:16
3.1 lnc-ADARB1-3:16
4.0 LINC00205:19
4.1 LINC00205:19
5.0 LINC00205:19
5.1 LINC00205:19
5.2 LINC00205:19