Transcript: LINC00205:4

Basic information

LNCipedia transcript ID: LINC00205:4 
LNCipedia gene ID: LINC00205
RefSeq ID: NR_026943
Location (hg19): chr21:46707967-46717269
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 7165 bp
Exons: 3
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT082933; NR_026943; NR_026943.1
Alternative gene names: ; LOC642852


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 38.1783 non-coding 
CPAT coding probability 25.54% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00205:4 no no no no

Available literature

  1. Reymond (2002), Nineteen additional unpredicted transcripts from human chromosome 21., Genomics


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ADARB1-3:17
4.0 LINC00205:4
4.1 LINC00205:4
5.0 LINC00205:4
5.1 LINC00205:4
5.2 LINC00205:4