Transcript: LINC00210:2

Basic information

LNCipedia transcript ID: LINC00210:2 
LNCipedia gene ID: LINC00210
Location (hg19): chr1:218066243-218094146
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1586 bp
Exons: 4
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: TCONS_00000391; ENST00000431637; ENST00000431637.1; LINC00210-001; OTTHUMT00000095287.1; NONHSAT009509
Alternative gene names: XLOC_000561; linc-RRP15-4; ENSG00000231814; NCRNA00210; ENSG00000231814.1; LINC00210; OTTHUMG00000039497.1; RP11-72L13.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -100.6033 non-coding 
CPAT coding probability 3.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00210:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SPATA17-1:1
3.1 lnc-SPATA17-1:1
4.0 LINC00210:2
4.1 LINC00210:2
5.0 LINC00210:2
5.1 LINC00210:2
5.2 LINC00210:2