Transcript: LINC00221:10

Basic information

LNCipedia transcript ID: LINC00221:10 
HGNC Gene Symbol: LINC00221    
HGNC Full Gene Name: long intergenic non-protein coding RNA 221
Ensembl Gene ID: ENSG00000270816
Ensembl Transcript ID: ENST00000620337
Location (hg19): :-
Strand:
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 484 bp
Exons: 0
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000620337.4
Alternative gene names: ENSG00000270816.5; LINC00221


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 15.6907 non-coding 
CPAT coding probability 2.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00221:10 no no no no

Available literature

  1. He (2013), LncRNAs expression in preeclampsia placenta reveals the potential role of LncRNAs contributing to preeclampsia pathogenesis., PLoS ONE


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 LINC00221:10
5.1 LINC00221:10
5.2 LINC00221:10