Transcript: LINC00222:2

Basic information

LNCipedia transcript ID: LINC00222:2 
LNCipedia gene ID: LINC00222
Location (hg19): chr6:109072857-109090773
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1880 bp
Exons: 5
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00011186; NONHSAT114361
Alternative gene names: XLOC_005421; linc-ARMC2; dJ354J5.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 0.3811 non-coding 
CPAT coding probability 1.32% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00222:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FOXO3-1:2
3.1 lnc-FOXO3-1:4
4.0 LINC00222:2
4.1 LINC00222:2
5.0 LINC00222:2
5.1 LINC00222:2
5.2 LINC00222:2