Transcript: LINC00229:1

Basic information

LNCipedia transcript ID: LINC00229:1 
LNCipedia gene ID: LINC00229
Location (hg19): chr22:45002085-45021310
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 960 bp
Exons: 5
Sources: NONCODE v4
Alternative transcript names: NONHSAT087176
Alternative gene names: dJ474I12.C22.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -77.2886 non-coding 
CPAT coding probability 5.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00229:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LDOC1L-1:2
4.0 LINC00229:1
4.1 LINC00229:1
5.0 LINC00229:1
5.1 LINC00229:1
5.2 LINC00229:1