Transcript: LINC00229:3

Basic information

LNCipedia transcript ID: LINC00229:3 
LNCipedia gene ID: LINC00229
RefSeq ID: NR_044991
Location (hg19): chr22:45002208-45021299
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 826 bp
Exons: 5
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_044991; NR_044991.1
Alternative gene names: dJ474I12.C22.2; LINC00229


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -77.2886 non-coding 
CPAT coding probability 5.34% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00229:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LDOC1L-1:3
4.0 LINC00229:3
4.1 LINC00229:3
5.0 LINC00229:3
5.1 LINC00229:3
5.2 LINC00229:3