Transcript: LINC00265:1

Basic information

LNCipedia transcript ID: LINC00265:1 
LNCipedia gene ID: LINC00265
Location (hg19): chr7:39739485-39777213
Strand: +
Class: sense-overlapping
Sequence Ontology term: sense_overlap_ncRNA
Transcript size: 1203 bp
Exons: 6
Sources: Nielsen et al.,2014
Alternative transcript names: l_3400_chr7:39739484-39777213_ovary
Alternative gene names: NCRNA00265-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -36.5327 non-coding 
CPAT coding probability 21.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00265:1 yes no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RALA-1:9
4.0 LINC00265:1
4.1 LINC00265:1
5.0 LINC00265:1
5.1 LINC00265:1
5.2 LINC00265:1