Transcript: LINC00284:15

Basic information

LNCipedia transcript ID: LINC00284:15 
LNCipedia gene ID: LINC00284
Location (hg19): chr13:44596624-44604073
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1885 bp
Exons: 3
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012
Alternative transcript names: ENST00000439707; ENST00000439707.1; LINC00284-001; OTTHUMT00000044728.1
Alternative gene names: ENSG00000233725; NCRNA00284; ENSG00000233725.1; LINC00284; OTTHUMG00000016827.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -78.2965 non-coding 
CPAT coding probability 0.90% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00284:15 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-LACC1-1:3
3.1 lnc-LACC1-1:3
4.0 LINC00284:15
4.1 LINC00284:15
5.0 LINC00284:15
5.1 LINC00284:15
5.2 LINC00284:15