Transcript: LINC00284:3

Basic information

LNCipedia transcript ID: LINC00284:3 
HGNC Gene Symbol: LINC00284    
HGNC Full Gene Name: long intergenic non-protein coding RNA 284
Ensembl Gene ID: ENSG00000233725
Ensembl Transcript ID: ENST00000439707
Location (hg19): chr13:44482863-44604597
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2521 bp
Exons: 5
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT033470; ENST00000439707.2; ENST00000439707.6
Alternative gene names: ENSG00000233725.3; LINC00284; ENSG00000233725.7;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -78.2965 non-coding 
CPAT coding probability 0.87% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00284:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LACC1-1:6
4.0 LINC00284:3
4.1 LINC00284:3
5.0 LINC00284:3
5.1 LINC00284:3
5.2 LINC00284:3