Transcript: LINC00297:1

Basic information

LNCipedia transcript ID: LINC00297:1 
HGNC Gene Symbol: LINC00297    
HGNC Full Gene Name: long intergenic non-protein coding RNA 297
Ensembl Gene ID: ENSG00000224329
Ensembl Transcript ID: ENST00000453470
RefSeq ID: NR_046510
Location (hg19): chr13:30446750-30462542
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 913 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT032754; NR_046510; ENST00000453470.2; NR_046510.1
Alternative gene names: ENSG00000224329.2; LINC00297;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -200.2432 non-coding 
CPAT coding probability 11.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00297:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-UBL3-4:1
4.0 LINC00297:1
4.1 LINC00297:1
5.0 LINC00297:1
5.1 LINC00297:1
5.2 LINC00297:1