Transcript: LINC00299:7

Basic information

LNCipedia transcript ID: LINC00299:7 
LNCipedia gene ID: LINC00299
Location (hg19): chr2:8347273-8468549
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1084 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT068984
Alternative gene names: FLJ45673


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -15.9405 non-coding 
CPAT coding probability 4.07% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00299:7 no no no no

Available literature

  1. Talkowski (2012), Disruption of a large intergenic noncoding RNA in subjects with neurodevelopmental disabilities., Am. J. Hum. Genet.
  2. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KIDINS220-6:14
4.0 LINC00299:7
4.1 LINC00299:7
5.0 LINC00299:7
5.1 LINC00299:7
5.2 LINC00299:7