Transcript: LINC00304:4

Basic information

LNCipedia transcript ID: LINC00304:4 
HGNC Gene Symbol: LINC00304    
HGNC Full Gene Name: long intergenic non-protein coding RNA 304
Ensembl Gene ID: ENSG00000180422
Ensembl Transcript ID: ENST00000321214
RefSeq ID: NR_024347
Location (hg19): chr16:89225628-89230083
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2243 bp
Exons: 4
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: TCONS_00024232; ENST00000321214; ENST00000321214.2; LINC00304-001; OTTHUMT00000430368.1; NONHSAT144474; NR_024347; NR_024347.2
Alternative gene names: XLOC_011833; linc-CDH15; ENSG00000180422; NCRNA00304; ENSG00000180422.3; LINC00304; OTTHUMG00000175524.2; FLJ36701


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 48.4745 non-coding 
CPAT coding probability 53.20% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC00304:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ACSF3-1:1
3.1 lnc-ACSF3-1:2
4.0 LINC00304:4
4.1 LINC00304:4
5.0 LINC00304:4
5.1 LINC00304:4
5.2 LINC00304:4