Transcript: LINC00310:28

Basic information

LNCipedia transcript ID: LINC00310:28 
LNCipedia gene ID: LINC00310
Location (hg19): chr21:35553010-35698022
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1250 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000214955.5|MICT00000225434.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -30.5173 non-coding 
CPAT coding probability 1.69% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00310:28 no no no no

Available literature

  1. Wang (2015), Multidrug-Resistance Related Long Non-Coding RNA Expression Profile Analysis of Gastric Cancer., PLoS ONE
  2. Reymond (2002), Nineteen additional unpredicted transcripts from human chromosome 21., Genomics


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 LINC00310:28
5.0 LINC00310:28
5.1 LINC00310:28
5.2 LINC00310:28

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