Transcript: LINC00320:33

Basic information

LNCipedia transcript ID: LINC00320:33 
LNCipedia gene ID: LINC00320
Location (hg19): chr21:22153129-22175405
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 548 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000224924.2|HBMT00000925081.1
Alternative gene names: PRED14; FLJ37539


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 3.1662 non-coding 
CPAT coding probability 5.97% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00320:33 no no no no

Available literature

  1. Mills (2015), Long intervening non-coding RNA 00320 is human brain-specific and highly expressed in the cortical white matter., Neurogenetics


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 LINC00320:33
5.0 LINC00320:33
5.1 LINC00320:33
5.2 LINC00320:33