Transcript: LINC00320:9

Basic information

LNCipedia transcript ID: LINC00320:9 
LNCipedia gene ID: LINC00320
Location (hg19): chr21:22114914-22175426
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2013 bp
Exons: 8
Sources: Broad Institute
Alternative transcript names: TCONS_00028753
Alternative gene names: XLOC_014019; linc-TMPRSS15-5; PRED14; FLJ37539


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 3.1662 non-coding 
CPAT coding probability 9.51% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00320:9 no no no no

Available literature

  1. Mills (2015), Long intervening non-coding RNA 00320 is human brain-specific and highly expressed in the cortical white matter., Neurogenetics


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TMPRSS15-9:6
3.1 lnc-TMPRSS15-9:7
4.0 LINC00320:9
4.1 LINC00320:9
5.0 LINC00320:9
5.1 LINC00320:9
5.2 LINC00320:9