Transcript: LINC00330:2

Basic information

LNCipedia transcript ID: LINC00330:2 
LNCipedia gene ID: LINC00330
RefSeq ID: NR_038433
Location (hg19): chr13:45373640-45383766
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2035 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_038433; NR_038433.2
Alternative gene names: ; LINC00330


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 51.7361 non-coding 
CPAT coding probability 73.56% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC00330:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NUFIP1-2:2
4.0 LINC00330:2
4.1 LINC00330:2
5.0 LINC00330:2
5.1 LINC00330:2
5.2 LINC00330:2