Transcript: LINC00331:4

Basic information

LNCipedia transcript ID: LINC00331:4 
LNCipedia gene ID: LINC00331
Location (hg19): chr13:79360569-79398977
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 847 bp
Exons: 5
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00022059; NONHSAT034464
Alternative gene names: XLOC_010664; linc-RNF219-1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -80.4182 non-coding 
CPAT coding probability 5.25% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00331:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RNF219-1:1
3.1 lnc-RNF219-1:1
4.0 LINC00331:4
4.1 LINC00331:4
5.0 LINC00331:4
5.1 LINC00331:4
5.2 LINC00331:4