Transcript: LINC00333:1

Basic information

LNCipedia transcript ID: LINC00333:1 
LNCipedia gene ID: LINC00333
RefSeq ID: NR_046871
Location (hg19): chr13:84714737-85180903
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 812 bp
Exons: 7
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT034549; NR_046871; NR_046871.1
Alternative gene names: ; LINC00333


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -0.9197 non-coding 
CPAT coding probability 10.29% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00333:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SLITRK5-12:2
4.0 LINC00333:1
4.1 LINC00333:1
5.0 LINC00333:1
5.1 LINC00333:1
5.2 LINC00333:1