Transcript: LINC00334:4

Basic information

LNCipedia transcript ID: LINC00334:4 
LNCipedia gene ID: LINC00334
RefSeq ID: NR_135279
Location (hg19): chr21:46654255-46678645
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 542 bp
Exons: 3
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_135279.1
Alternative gene names: LINC00334


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -4.7471 non-coding 
CPAT coding probability 25.83% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00334:4 no no no no

Available literature

  1. Reymond (2002), Nineteen additional unpredicted transcripts from human chromosome 21., Genomics


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 LINC00334:4
5.1 LINC00334:4
5.2 LINC00334:4