Transcript: LINC00351:1

Basic information

LNCipedia transcript ID: LINC00351:1 
LNCipedia gene ID: LINC00351
Location (hg19): chr13:85937736-86118705
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 913 bp
Exons: 4
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: TCONS_00021580; ENST00000424926; ENST00000424926.1; LINC00351-001; OTTHUMT00000045403.1; NONHSAT034563
Alternative gene names: XLOC_010460; linc-SLITRK5-3; ENSG00000226317; RP11-76K10.1; ENSG00000226317.1; LINC00351; OTTHUMG00000017156.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -11.599 non-coding 
CPAT coding probability 3.32% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00351:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SLITRK5-10:1
3.1 lnc-SLITRK5-11:1
4.0 LINC00351:1
4.1 LINC00351:1
5.0 LINC00351:1
5.1 LINC00351:1
5.2 LINC00351:1