Transcript: LINC00354:5

Basic information

LNCipedia transcript ID: LINC00354:5 
LNCipedia gene ID: LINC00354
RefSeq ID: NR_120401
Location (hg19): chr13:112547810-112555490
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 579 bp
Exons: 4
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_120401; NR_120401.1
Alternative gene names: ; LINC00354


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -189.7214 non-coding 
CPAT coding probability 2.33% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00354:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SOX1-4:10
4.0 LINC00354:5
4.1 LINC00354:5
5.0 LINC00354:5
5.1 LINC00354:5
5.2 LINC00354:5