Transcript: LINC00358:3

Basic information

LNCipedia transcript ID: LINC00358:3 
HGNC Gene Symbol: LINC00358    
HGNC Full Gene Name: long intergenic non-protein coding RNA 358
Ensembl Gene ID: ENSG00000229578
Ensembl Transcript ID: ENST00000432697
RefSeq ID: NR_046995
Location (hg19): chr13:62577658-62603681
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1276 bp
Exons: 2
Sources: Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_046995; ENST00000432697.2; NR_046995.1
Alternative gene names: ENSG00000229578.2; LINC00358;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -63.2222 non-coding 
CPAT coding probability 3.76% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00358:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PCDH20-1:3
4.0 LINC00358:3
4.1 LINC00358:3
5.0 LINC00358:3
5.1 LINC00358:3
5.2 LINC00358:3