Transcript: LINC00363:4

Basic information

LNCipedia transcript ID: LINC00363:4 
HGNC Gene Symbol: LINC00363    
HGNC Full Gene Name: long intergenic non-protein coding RNA 363
Ensembl Gene ID: ENSG00000232849
Ensembl Transcript ID: ENST00000443228
Location (hg19): chr13:93708910-93710179
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 210 bp
Exons: 2
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00021586; ENST00000443228; ENST00000443228.1; RP11-632L2.1-001; OTTHUMT00000045456.1; NONHSAT034709
Alternative gene names: XLOC_010471; linc-GPC6; ENSG00000232849; RP11-632L2.1; ENSG00000232849.1; OTTHUMG00000017201.1; LINC00363; TCONS_00021586


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -643.0745 non-coding 
CPAT coding probability 1.96% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00363:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-GPC5-7:3
3.1 lnc-GPC6-1:3
4.0 LINC00363:4
4.1 LINC00363:4
5.0 LINC00363:4
5.1 LINC00363:4
5.2 LINC00363:4