Transcript: LINC00365:2

Basic information

LNCipedia transcript ID: LINC00365:2 
LNCipedia gene ID: LINC00365
Location (hg19): chr13:30677366-30683005
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2567 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00021510
Alternative gene names: XLOC_010553; linc-UBL3-2;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -82.8287 non-coding 
CPAT coding probability 4.35% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00365:2 no no no no

Available literature

  1. Fan (2016), Identification of a RNA-Seq Based 8-Long Non-Coding RNA Signature Predicting Survival in Esophageal Cancer., Med. Sci. Monit.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-KATNAL1-4:2
3.1 lnc-KATNAL1-4:2
4.0 LINC00365:2
4.1 LINC00365:2
5.0 LINC00365:2
5.1 LINC00365:2
5.2 LINC00365:2