Transcript: LINC00377:2

Basic information

LNCipedia transcript ID: LINC00377:2 
LNCipedia gene ID: LINC00377
Location (hg19): chr13:81592377-81592799
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 261 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00021860; NONHSAT034517
Alternative gene names: XLOC_010454; linc-SLITRK5-9; TCONS_00021861


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -321.7535 non-coding 
CPAT coding probability 2.64% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00377:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-NDFIP2-9:1
3.1 lnc-NDFIP2-9:1
4.0 LINC00377:2
4.1 LINC00377:2
5.0 LINC00377:2
5.1 LINC00377:2
5.2 LINC00377:2