Transcript: LINC00383:1

Basic information

LNCipedia transcript ID: LINC00383:1 
LNCipedia gene ID: LINC00383
Location (hg19): chr13:69795972-69866286
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1548 bp
Exons: 4
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT034241; FPKM1_group_8066_transcript_4
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 12.5477 non-coding 
CPAT coding probability 0.39% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00383:1 no no no no

Available literature

  1. Fang (2014), Long non-coding RNAs are differentially expressed in hepatocellular carcinoma cell lines with differing metastatic potential., Asian Pac. J. Cancer Prev.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-BORA-6:2
4.0 LINC00383:1
4.1 LINC00383:1
5.0 LINC00383:1
5.1 LINC00383:1
5.2 LINC00383:1