Transcript: LINC00390:4

Basic information

LNCipedia transcript ID: LINC00390:4 
LNCipedia gene ID: LINC00390
Location (hg19): chr13:44677950-44681904
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2861 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00021984; NONHSAT033481
Alternative gene names: XLOC_010585; linc-CCDC122-3; TCONS_00021641


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -111.1234 non-coding 
CPAT coding probability 0.78% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00390:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-C13orf44-1:4
3.1 lnc-C13orf44-1:4
4.0 LINC00390:4
4.1 LINC00390:4
5.0 LINC00390:4
5.1 LINC00390:4
5.2 LINC00390:4