Transcript: LINC00396:1

Basic information

LNCipedia transcript ID: LINC00396:1 
LNCipedia gene ID: LINC00396
Location (hg19): chr13:110675327-110675741
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 415 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT035125
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -192.3527 non-coding 
CPAT coding probability 3.12% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00396:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-COL4A2-2:3
4.0 LINC00396:1
4.1 LINC00396:1
5.0 LINC00396:1
5.1 LINC00396:1
5.2 LINC00396:1