Transcript: LINC00402:5

Basic information

LNCipedia transcript ID: LINC00402:5 
LNCipedia gene ID: LINC00402
Location (hg19): chr13:74862164-74982939
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2401 bp
Exons: 2
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; NONCODE v4
Alternative transcript names: ENST00000535519; NONHSAT034323
Alternative gene names: ENSG00000256370; AL353660.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 1.9435 non-coding 
CPAT coding probability 0.15% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00402:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-UCHL3-7:1
3.1 lnc-UCHL3-9:1
4.0 LINC00402:5
4.1 LINC00402:5
5.0 LINC00402:5
5.1 LINC00402:5
5.2 LINC00402:5