Transcript: LINC00442:9

Basic information

LNCipedia transcript ID: LINC00442:9 
LNCipedia gene ID: LINC00442
Location (hg19): chr13:19585667-19586568
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 784 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00022135; NONHSAT032242
Alternative gene names: XLOC_010288; linc-MPHOSPH8-4;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 6.4542 non-coding 
CPAT coding probability 62.82% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC00442:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RP11-408E5.4.1-3:5
3.1 lnc-RP11-408E5.4.1-4:7
4.0 LINC00442:9
4.1 LINC00442:9
5.0 LINC00442:9
5.1 LINC00442:9
5.2 LINC00442:9