Transcript: LINC00466:20

Basic information

LNCipedia transcript ID: LINC00466:20 
LNCipedia gene ID: LINC00466
Location (hg19): chr1:63673553-63782919
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 413 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000224209.2|MICT00000012398.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -143.0346 non-coding 
CPAT coding probability 5.77% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00466:20 no no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 LINC00466:20
5.0 LINC00466:20
5.1 LINC00466:20
5.2 LINC00466:20