Transcript: LINC00466:8

Basic information

LNCipedia transcript ID: LINC00466:8 
LNCipedia gene ID: LINC00466
Location (hg19): chr1:63728035-63781800
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 570 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT003666
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -90.5004 non-coding 
CPAT coding probability 19.29% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00466:8 no no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ITGB3BP-2:8
4.0 LINC00466:8
4.1 LINC00466:8
5.0 LINC00466:8
5.1 LINC00466:8
5.2 LINC00466:8