Transcript: LINC00499:1

Basic information

LNCipedia transcript ID: LINC00499:1 
LNCipedia gene ID: LINC00499
Location (hg19): chr4:139230864-139345498
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1958 bp
Exons: 6
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT098429; FPKM1_group_24180_transcript_3
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -9.1476 non-coding 
CPAT coding probability 3.29% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00499:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CCRN4L-3:5
4.0 LINC00499:1
4.1 LINC00499:1
5.0 LINC00499:1
5.1 LINC00499:1
5.2 LINC00499:1