Transcript: LINC00504:7

Basic information

LNCipedia transcript ID: LINC00504:7 
HGNC Gene Symbol: LINC00504    
HGNC Full Gene Name: long intergenic non-protein coding RNA 504
Ensembl Gene ID: ENSG00000248360
Ensembl Transcript ID: ENST00000506292
Location (hg19): chr4:14630380-14718219
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 462 bp
Exons: 4
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000506292.2; LINC00504-004; OTTHUMT00000359284.3; NONHSAT095606
Alternative gene names: ENSG00000248360.2; LINC00504; OTTHUMG00000160121.4; ENSG00000248360.3; ENSG00000248360.7;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 2.5015 non-coding 
CPAT coding probability 2.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00504:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FBXL5-4:4
4.0 LINC00504:7
4.1 LINC00504:7
5.0 LINC00504:7
5.1 LINC00504:7
5.2 LINC00504:7