Transcript: LINC00513:13

Basic information

LNCipedia transcript ID: LINC00513:13 
LNCipedia gene ID: LINC00513
Location (hg19): chr7:130565958-130793564
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 6821 bp
Exons: 10
Sources: NONCODE v4
Alternative transcript names: NONHSAT123371
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -20.0618 non-coding 
CPAT coding probability 6.45% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00513:13 no no no no

Available literature

  1. Liu (2017), CRISPRi-based genome-scale identification of functional long noncoding RNA loci in human cells., Science


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MKLN1-1:6
4.0 lnc-MKLN1-1:6
4.1 lnc-MKLN1-1:6
5.0 lnc-MKLN1-1:6
5.1 LINC00513:3
5.2 LINC00513:13