Transcript: LINC00534:3

Basic information

LNCipedia transcript ID: LINC00534:3 
LNCipedia gene ID: LINC00534
RefSeq ID: NR_051989
Location (hg19): chr8:91233716-91400187
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 869 bp
Exons: 4
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT127644; NR_051989; NR_051989.1
Alternative gene names: ; LINC00534


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -38.2132 non-coding 
CPAT coding probability 3.11% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00534:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DECR1-1:5
4.0 LINC00534:3
4.1 LINC00534:3
5.0 LINC00534:3
5.1 LINC00534:3
5.2 LINC00534:3