Transcript: LINC00535:10

Basic information

LNCipedia transcript ID: LINC00535:10 
LNCipedia gene ID: LINC00535
Location (hg19): chr8:94689514-94712705
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 5449 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000246662.2|ENCT00000438050.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -2.2832 non-coding 
CPAT coding probability 0.20% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00535:10 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 LINC00535:10
5.0 LINC00535:10
5.1 LINC00535:10
5.2 LINC00535:10