Transcript: LINC00536:1
Basic information
LNCipedia transcript ID: LINC00536:1
HGNC Gene Symbol: LINC00536
HGNC Full Gene Name:
long intergenic non-protein coding RNA 536
Ensembl Gene ID:
ENSG00000249917
Ensembl Transcript ID:
ENST00000505156
RefSeq ID:
NR_046215
Location (hg19): chr8:116962736-117337297
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2692 bp
Exons: 14
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000505156; ENST00000505156.2; LINC00536-001; OTTHUMT00000381020.1; NONHSAT128366; NR_046215; NR_046215.1
Alternative gene names: ENSG00000249917; AF130342.1; ENSG00000249917.2; LINC00536; OTTHUMG00000164936.1;
RNA sequence:
Structure:
Protein coding potential
In stringent set: yes
Locus conservation
| Locus conservation? |  |
 |
 |
 |
|---|---|---|---|---|
| LINC00536:1 | no | no | no | no |
Available literature
- Li (2015), Annular pancreas in Trichorhinophalangeal syndrome type II with 8q23.3-q24.12 interstitial deletion., Mol Cytogenet
- Crippa (2014), New case of trichorinophalangeal syndrome-like phenotype with a de novo t(2;8)(p16.1;q23.3) translocation which does not disrupt the TRPS1 gene., BMC Med. Genet.
LNCipedia transcript ID history
| LNCipedia version | LNCipedia transcript ID |
|---|---|
| 1.3 | lnc-TRPS1-1:1 |
| 3.1 | lnc-TRPS1-1:1 |
| 4.0 | LINC00536:1 |
| 4.1 | LINC00536:1 |
| 5.0 | LINC00536:1 |
| 5.1 | LINC00536:1 |
| 5.2 | LINC00536:1 |